Much is of the "Perception is reality", indicating my replies were complex ( can be, also has basic information ) and by implication not useful in the compounding problems you have there Rokka. Fault diagnosis, remedy or repair can be more so based in philosophy than outright technical skill.
No doubt you have a technical aptitude, refined it will bring the desired result, seems from half a world away, changing too many things is obscuring the faults or more importantly, faults that appear as one fault only. Suppose at risk of stating one mans perception, restore the ignition as close to when running, then divide the ignition into two parts, as mentioned.
If nothing else, remove the anti start resistors ( 0,9 Ohm serve no gain in ignition performance ) ensure the HT leads are copper wire, not car silicone graphite composition, measure from the HT plug cap back into the coil secondary, to primary connection or frame, should be 5K ohm for the spark plug cover, plus around 15K for the secondary winding DC resistance, 20K there about, on all three coils, move the various electrical cables and connections as you measure for secure electrical performance. One of many tests this particular one, more the matter of eliminating parts of the circuit so concentrated effort on the actual area of concern. Intermittent issues can be particularly difficult, at first.
What ignition coils are on the RGS, not dark red are they? j